5 References

  • A.M. Maxam, W. Gilbert. A new method for sequencing DNA Proc. Natl.Acad.Sci.USA, 74 (1977), pp. 560-564
  • Sanger F, Nicklen S, Coulson AR. DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977;74(12):5463-5467. doi:10.1073/pnas.74.12.5463
  • Hutchison CA 3rd. DNA sequencing: bench to bedside and beyond. Nucleic Acids Res. 2007;35(18):6227-6237. doi:10.1093/nar/gkm688
  • NHGRI. The Cost of Sequencing a Human Genome. https://www.genome.gov/about-genomics/fact-sheets/Sequencing-Human-Genome-cost
  • Hu T, Chitnis N, Monos D, Dinh A. Next-generation sequencing technologies: An overview. Hum Immunol. 2021;82(11):801-811. doi:10.1016/j.humimm.2021.02.012
  • Venter, J. C. (2007) A Life Decoded, 1st ed., Viking, New York.
  • S. Levy, G. Sutton, P.C. Ng, L. Feuk, A.L. Halpern, B.P. Walenz, et al. The Diploid Genome Sequence of an Individual Human, PLoS Biol. 5 (2007) e254.
  • Nakagawa H, Wardell CP, Furuta M, Taniguchi H, Fujimoto A. Cancer whole genome sequencing: present and future. Oncogene. 2015;34:5943-5950.
  • Nakagawa H, Fujita M. Whole genome sequencing analysis for cancer genomics and precision medicine. Cancer Sci. 2018;109(3):513-522. doi:10.1111/cas.13505
  • Chevalier, A., et al. The Mutational Signature Comprehensive Analysis Toolkit (musicatk) for the Discovery, Prediction, and Exploration of Mutational Signatures. Cancer Res 2021;81(23):5813-5817.
  • Wang K, Li M, Hakonarson H. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res. 2010;38(16):e164.
  • Obenchain, V., et al., VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants. Bioinformatics, 2014. 30(14): p. 2076-8.
  • Liang Y, Xie J, Zhang Q, et al. AGBE: a dual deaminase-mediated base editor by fusing CGBE with ABE for creating a saturated mutant population with multiple editing patterns. Nucleic Acids Res. 2022;50(9):5384-5399.
  • Dusa, Adrian (2021): venn: Draw Venn Diagrams. Comprehensive R Archive Network. https://CRAN.R-project.org/package=venn
  • Gu, Z.et al. (2014) circlize implements and enhances circular visualization in R. Bioinformatics, 30, 2811–2812.